########################################
# Program:  matcher
# Rundate:  Fri Sep 12 15:39:10 2003
# Align_format: markx0
# Report_file: /var/www/html/align.outfile
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: aroe1
# 2: aroe2
# Matrix: EDNAFULL
# Gap_penalty: 16
# Extend_penalty: 4
#
# Length: 405
# Identity:     402/405 (99.3%)
# Similarity:   402/405 (99.3%)
# Gaps:           0/405 ( 0.0%)
# Score: 1998
# 
#
#=======================================


               10        20        30        40        50
 aroe1 GAAGCGAGTGACTTGGCAGAAACAGTGGCCAATATTCGTCGCTACCAGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::
 aroe2 GAAGCGAGTGACTTGGCAGAAACAGTGGCCAATATTCGTCGCTACCAGAT
               10        20        30        40        50

               60        70        80        90       100
 aroe1 GTTTGGCATCAATCTGTCCATGCCCTATAAGGAGCAGGTGATTCCTTATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::
 aroe2 GTTTGGCATCAATCTGTCCATGCCCTATAAGGAGCAGGTGATTCCTTATT
               60        70        80        90       100

              110       120       130       140       150
 aroe1 TGGATGAGCTAAGCGATGAAGCGCGCTTGATTGGTGCGGTTAATACGGTT
       ::::: :::: :::::::::::::::::::::::::::::::::::::::
 aroe2 TGGATAAGCTGAGCGATGAAGCGCGCTTGATTGGTGCGGTTAATACGGTT
              110       120       130       140       150

              160       170       180       190       200
 aroe1 GTCAATGAGAATGGCAATTTAATTGGATATAATACAGATGGCAAGGGATT
       ::::::::::::::::::::::::::::::::::::::::::::::::::
 aroe2 GTCAATGAGAATGGCAATTTAATTGGATATAATACAGATGGCAAGGGATT
              160       170       180       190       200

              210       220       230       240       250
 aroe1 TTTTAAGTGCTTGCCTTCTTTTACAATTTCAGGTAAAAAGATGACCCTGC
       ::::::::::::::::::::::::::::::::::::::::::::::::::
 aroe2 TTTTAAGTGCTTGCCTTCTTTTACAATTTCAGGTAAAAAGATGACCCTGC
              210       220       230       240       250

              260       270       280       290       300
 aroe1 TGGGTGCAGGTGGTGCGGCTAAATCAATCTTGGCACAGGCTATTTTGGAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::
 aroe2 TGGGTGCAGGTGGTGCGGCTAAATCAATCTTGGCACAGGCTATTTTGGAT
              260       270       280       290       300

              310       320       330       340       350
 aroe1 GGCGTCAGTCAGATTTCGGTCTTTGTTCGTTCCGTTTCTATGGAAAAAAC
       ::::::::::::::::::::::::::::::::::::::::::::::::::
 aroe2 GGCGTCAGTCAGATTTCGGTCTTTGTTCGTTCCGTTTCTATGGAAAAAAC
              310       320       330       340       350

              360       370       380       390       400
 aroe1 AAGACCTTACCTAGACAAGTTACAGGAGCAGACAGGCTTTAAAGTGGATT
       :::::::::::::::::::::::::::::::::::: :::::::::::::
 aroe2 AAGACCTTACCTAGACAAGTTACAGGAGCAGACAGGTTTTAAAGTGGATT
              360       370       380       390       400

            
 aroe1 TGTGT
       :::::
 aroe2 TGTGT
            

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